We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
246 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
Page
of 5 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
A1BG
ENSSSCG00000004001
ENSG00000121410
Alpha-1-B glycoprotein
Tissue enriched
Detected in some
liver:
277.4
A1CF
ENSSSCG00000010431
ENSG00000148584
APOBEC1 complementation factor
Tissue enriched
Detected in some
liver:
99.7
ABCB11
ENSSSCG00000015926
ENSG00000073734
ATP binding cassette subfamily B member 11
Tissue enriched
Detected in single
liver:
107.1
ABCB4
ENSSSCG00000024520
ENSG00000005471
ATP binding cassette subfamily B member 4
Tissue enriched
Detected in some
liver:
31.9
ABCC6
ENSSSCG00000007873
ENSG00000091262
ATP binding cassette subfamily C member 6
Tissue enriched
Detected in some
liver:
71.9
ACOT12
ENSSSCG00000036095
ENSG00000172497
Acyl-CoA thioesterase 12
Tissue enriched
Detected in some
liver:
41.7
ACSM4
ENSSSCG00000030033
ENSG00000215009
Acyl-CoA synthetase medium-chain family member 4
Tissue enriched
Detected in some
liver:
189.4
ADH4
ENSSSCG00000009184
ENSG00000198099
Alcohol dehydrogenase 4
Tissue enriched
Detected in some
liver:
65.6
ADH6
ENSSSCG00000039017
ENSG00000172955
Alcohol dehydrogenase 6 (class V)
Tissue enriched
Detected in some
liver:
50.1
AFM
ENSSSCG00000008950
ENSG00000079557
Afamin
Tissue enriched
Detected in single
liver:
137.1
AFP
ENSSSCG00000008949
ENSG00000081051
Alpha-fetoprotein
Tissue enriched
Detected in single
gallbladder:
206.7
AHSG
ENSSSCG00000011799
ENSG00000145192
Alpha 2-HS glycoprotein
Tissue enriched
Detected in some
liver:
300.9
AKR1D1
ENSSSCG00000016519
ENSG00000122787
Aldo-keto reductase family 1 member D1
Tissue enriched
Detected in some
liver:
134.2
ALB
ENSSSCG00000008948
ENSG00000163631
Serum albumin precursor
Tissue enriched
Detected in some
liver:
1405.1
AMBP
ENSSSCG00000005485
ENSG00000106927
Protein AMBP precursor
Tissue enriched
Detected in some
liver:
375.7
AMDHD1
ENSSSCG00000000893
ENSG00000139344
Amidohydrolase domain containing 1
Tissue enriched
Detected in many
liver:
83.9
ANGPTL3
ENSSSCG00000003819
ENSG00000132855
Angiopoietin-related protein 3 precursor
Tissue enriched
Detected in some
liver:
97.0
ANGPTL8
ENSSSCG00000036965
ENSG00000130173
Angiopoietin like 8
Tissue enriched
Detected in single
liver:
51.8
ANXA4
ENSSSCG00000008336
ENSG00000196975
Annexin A4
Tissue enriched
Detected in many
gallbladder:
149.4
AOX1
ENSSSCG00000029606
ENSG00000138356
Aldehyde oxidase
Tissue enriched
Detected in many
liver:
125.2
APCS
ENSSSCG00000037268
ENSG00000132703
Serum amyloid P-component
Tissue enriched
Detected in many
liver:
112.8
APOA2
ENSSSCG00000006355
ENSG00000158874
Apolipoprotein A-II precursor
Tissue enriched
Detected in some
liver:
315.5
APOA5
ENSSSCG00000015067
ENSG00000110243
Apolipoprotein A-V precursor
Tissue enriched
Detected in some
liver:
64.0
APOB
ENSSSCG00000008595
ENSG00000084674
Apolipoprotein B-100
Tissue enriched
Detected in some
liver:
207.3
APOC2
ENSSSCG00000003086
ENSG00000234906
Apolipoprotein C-II precursor
Tissue enriched
Detected in some
liver:
223.8
APOC3
ENSSSCG00000015069
ENSG00000110245
Apolipoprotein C-III
Tissue enriched
Detected in some
liver:
814.1
APOC4
ENSSSCG00000031646
Apolipoprotein C-IV precursor
Tissue enriched
Detected in all
liver:
97.0
APOE
ENSSSCG00000003088
ENSG00000130203
Apolipoprotein E precursor
Tissue enriched
Detected in many
liver:
755.1
APOF
ENSSSCG00000000398
Apolipoprotein F precursor
Tissue enriched
Detected in some
liver:
141.0
APOH
ENSSSCG00000040910
ENSG00000091583
Apolipoprotein H
Tissue enriched
Detected in some
liver:
343.6
ARG1
ENSSSCG00000004195
ENSG00000118520
Arginase-1
Tissue enriched
Detected in some
liver:
104.1
ASGR1
ENSSSCG00000024926
ENSG00000141505
Asialoglycoprotein receptor 1
Tissue enriched
Detected in some
liver:
77.7
ATOH7
ENSSSCG00000021995
ENSG00000179774
Atonal bHLH transcription factor 7
Tissue enriched
Detected in some
liver:
15.5
BCO2
ENSSSCG00000015039
ENSG00000197580
Beta-carotene oxygenase 2
Tissue enriched
Detected in many
liver:
70.3
BHMT
ENSSSCG00000014108
ENSG00000145692
Betaine--homocysteine S-methyltransferase 1
Tissue enriched
Detected in some
liver:
201.3
C8A
ENSSSCG00000003835
ENSG00000157131
Complement C8 alpha chain
Tissue enriched
Detected in some
liver:
106.5
C8B
ENSSSCG00000003834
ENSG00000021852
Complement component C8 beta chain precursor
Tissue enriched
Detected in many
liver:
121.4
C8G
ENSSSCG00000005840
ENSG00000176919
Complement component C8 gamma chain precursor
Tissue enriched
Detected in some
liver:
111.8
C9
ENSSSCG00000016856
ENSG00000113600
Complement component C9 precursor
Tissue enriched
Detected in some
liver:
150.1
CA4
ENSSSCG00000023186
ENSG00000167434
Carbonic anhydrase 4 precursor
Tissue enriched
Detected in many
gallbladder:
83.4
CA5A
ENSSSCG00000035629
ENSG00000174990
Carbonic anhydrase 5A
Tissue enriched
Detected in some
liver:
65.5
CCL16
ENSSSCG00000040940
ENSG00000275152
C-C motif chemokine ligand 16
Tissue enriched
Detected in many
liver:
145.0
CHRD
ENSSSCG00000025270
ENSG00000090539
Chordin
Tissue enriched
Detected in many
liver:
64.9
CLDN14
ENSSSCG00000020680
ENSG00000159261
Claudin-14
Tissue enriched
Detected in some
liver:
60.1
COLEC10
ENSSSCG00000029324
ENSG00000184374
Collectin subfamily member 10
Tissue enriched
Detected in many
liver:
42.0
COLEC11
ENSSSCG00000025629
ENSG00000118004
Collectin subfamily member 11
Tissue enriched
Detected in all
liver:
41.1
CP
ENSSSCG00000011700
ENSG00000047457
Ceruloplasmin precursor
Tissue enriched
Detected in many
liver:
192.8
CPB2
ENSSSCG00000009413
ENSG00000080618
Carboxypeptidase B2
Tissue enriched
Detected in some
liver:
136.6
CPS1
ENSSSCG00000016159
ENSG00000021826
Carbamoyl-phosphate synthase 1
Tissue enriched
Detected in some
liver:
151.7
CREB3L3
ENSSSCG00000013501
ENSG00000060566
CAMP responsive element binding protein 3 like 3
Tissue enriched
Detected in some
liver:
84.3
Page
of 5 |
next »